From 4e428b412b476cef521519da725fb300adf43031 Mon Sep 17 00:00:00 2001 From: aakan96 <aakan96@mi.fu-berlin.de> Date: Fri, 21 Jul 2023 09:23:28 +0000 Subject: [PATCH] Update file README.md --- 06_Survival_Analysis/README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/06_Survival_Analysis/README.md b/06_Survival_Analysis/README.md index c2756d8..d6a0414 100644 --- a/06_Survival_Analysis/README.md +++ b/06_Survival_Analysis/README.md @@ -1 +1 @@ -We tried first to do with the code above and also using UCSCXenaTools, a nice guide is also provided here: https://www.r-bloggers.com/2019/09/ucscxenatools-retrieve-gene-expression-and-clinical-information-from-ucsc-xena-for-survival-analysis/ , but due to lack of clinical data for ESCC in UCSCXenaTools (as far as we tried), we couldnt continue with them. So for survival analysis , we used the website http://www.bioinfo-zs.com/esccexpress/ \ No newline at end of file +We tried first to do with the code above for getting the clinical data and doing the survival analysis using specific gene from TCGA and also using UCSCXenaTools, a nice guide is also provided here: https://www.r-bloggers.com/2019/09/ucscxenatools-retrieve-gene-expression-and-clinical-information-from-ucsc-xena-for-survival-analysis/ , but due to lack of clinical data for ESCC in UCSCXenaTools (as far as we tried), we couldnt continue with them. So for survival analysis , we used the website http://www.bioinfo-zs.com/esccexpress/ \ No newline at end of file -- GitLab