diff --git a/configuration/samplesTest.tsv b/configuration/samplesTest.tsv index c3fbaae96ee113ebad791bf47d3e05acdbad8b29..ed266c0460e1f8a79c4b0701c56da21ec469242c 100644 --- a/configuration/samplesTest.tsv +++ b/configuration/samplesTest.tsv @@ -1,4 +1,4 @@ -assemblyName Library_R1 Library_R2 assembly_fasta EstimatedSize(bps) -ChrysemysPicta /path/to/genome_evaluation_snakemake/testData/cPicta_Lib1_R1_subsampled25K.fastq.gz /path/to/genome_evaluation_snakemake/testData/cPicta_Lib1_R2_subsampled25K.fastq.gz /path/to/genome_evaluation_snakemake/testData/cPicta_subsampled10K_assembly.fasta -ChelydraSerpentina /path/to/genome_evaluation_snakemake/testData/cheSerpentina_Lib1_R1_subsampled25K.fastq.gz /path/to/genome_evaluation_snakemake/testData/cheSerpentina_Lib1_R2_subsampled25K.fastq.gz /path/to/genome_evaluation_snakemake/testData/cheSerpentina_subsampled6K_assembly.fasta -ChelydraSerpentina /path/to/genome_evaluation_snakemake/testData/cheSerpentina_Lib2_R1_subsampled15K.fastq.gz /path/to/genome_evaluation_snakemake/testData/cheSerpentina_Lib2_R2_subsampled15K.fastq.gz /path/to/genome_evaluation_snakemake/testData/cheSerpentina_subsampled6K_assembly.fasta +assemblyName Library_R1 Library_R2 assembly_fasta EstimatedSize(bps) +ChrysemysPicta /<PathTo>/GEP/testData/cPicta_R1.fastq.gz /<PathTo>/GEP/testData/cPicta_R2.fastq.gz /<PathTo>/GEP/testData/cPicta_assembly.fasta +ChelydraSerpentina /<PathTo>/GEP/testData/cheSerpentina_library1_R1.fastq.gz /<PathTo>/GEP/testData/cheSerpentina_library1_R2.fastq.gz /<PathTo>/GEP/testData/cheSerpentina_assembly.fasta +ChelydraSerpentina /<PathTo>/GEP/testData/cheSerpentina_library2_R1.fastq.gz /<PathTo>/GEP/testData/cheSerpentina_library2_R2.fastq.gz /<PathTo>/GEP/testData/cheSerpentina_assembly.fasta diff --git a/testData/cPicta_Lib1_R1_subsampled25K.fastq.gz b/testData/cPicta_R1.fastq.gz similarity index 100% rename from testData/cPicta_Lib1_R1_subsampled25K.fastq.gz rename to testData/cPicta_R1.fastq.gz diff --git a/testData/cPicta_Lib1_R2_subsampled25K.fastq.gz b/testData/cPicta_R2.fastq.gz similarity index 100% rename from testData/cPicta_Lib1_R2_subsampled25K.fastq.gz rename to testData/cPicta_R2.fastq.gz diff --git a/testData/cPicta_subsampled10K_assembly.fasta b/testData/cPicta_assembly.fasta similarity index 100% rename from testData/cPicta_subsampled10K_assembly.fasta rename to testData/cPicta_assembly.fasta diff --git a/testData/cheSerpentina_subsampled6K_assembly.fasta b/testData/cheSerpentina_assembly.fasta similarity index 100% rename from testData/cheSerpentina_subsampled6K_assembly.fasta rename to testData/cheSerpentina_assembly.fasta diff --git a/testData/cheSerpentina_Lib1_R1_subsampled25K.fastq.gz b/testData/cheSerpentina_library1_R1.fastq.gz similarity index 100% rename from testData/cheSerpentina_Lib1_R1_subsampled25K.fastq.gz rename to testData/cheSerpentina_library1_R1.fastq.gz diff --git a/testData/cheSerpentina_Lib1_R2_subsampled25K.fastq.gz b/testData/cheSerpentina_library1_R2.fastq.gz similarity index 100% rename from testData/cheSerpentina_Lib1_R2_subsampled25K.fastq.gz rename to testData/cheSerpentina_library1_R2.fastq.gz diff --git a/testData/cheSerpentina_Lib2_R1_subsampled15K.fastq.gz b/testData/cheSerpentina_library2_R1.fastq.gz similarity index 100% rename from testData/cheSerpentina_Lib2_R1_subsampled15K.fastq.gz rename to testData/cheSerpentina_library2_R1.fastq.gz diff --git a/testData/cheSerpentina_Lib2_R2_subsampled15K.fastq.gz b/testData/cheSerpentina_library2_R2.fastq.gz similarity index 100% rename from testData/cheSerpentina_Lib2_R2_subsampled15K.fastq.gz rename to testData/cheSerpentina_library2_R2.fastq.gz