diff --git a/Snakefile b/Snakefile index 018f339c95ddaed998fbbaa152ec913c9a307ced..f30a569caf3a44c82d089c0134aa54f793f26e72 100644 --- a/Snakefile +++ b/Snakefile @@ -236,7 +236,7 @@ elif set(['ID', 'PRI_asm', 'ALT_asm', 'merylDB', 'merylDB_kmer', 'genomeSize', ' samples=samples.set_index(['ID']) - testDict=samples.T.to_dict('list') + dictSamples=samples.T.to_dict('list') ruleAllQCFiles=[] ruleAll=expand(os.path.join(config['Results'],"1_evaluation/{asmID}/06_keyResults/{asmID}_aggregatedResults.tsv"), asmID=list(dictSamples.keys())), os.path.join(config['Results'],"1_evaluation/finalResults/Combined_Results_FULLTABLE.tsv"), os.path.join(config['Results'],"1_evaluation/finalResults/FULL_Report_PDF.pdf"),os.path.join(config['Results'],"1_evaluation/finalResults/FULL_TABLE_PDF.pdf")