From be7d1dafba150a5e2a7211d66500db2caacc8e85 Mon Sep 17 00:00:00 2001
From: james94 <james94@mi.fu-berlin.de>
Date: Wed, 1 Jun 2022 09:54:11 +0200
Subject: [PATCH] add general workflow image to READme

---
 README.md | 8 ++++++--
 1 file changed, 6 insertions(+), 2 deletions(-)

diff --git a/README.md b/README.md
index d065bae..c8543a3 100644
--- a/README.md
+++ b/README.md
@@ -16,9 +16,13 @@
 
 ---
 
+## General Workflow of Genome evaluation
 
+![](https://i.imgur.com/tJ01F00.png)
 
-## The Workflow - Two *Modes*
+
+
+## The GEP Workflow - Two *Modes*
 
 
 1. [**Build** meryl k-mer databases](#build-meryl-k-mer-databases)
@@ -347,7 +351,7 @@ The `--contain` flag ensures that the container is completely kept separate from
 #### EXAMPLE SINGULARITY EXECUTION
 
 ```
-snakemake --profile SUBMIT_CONFIG/slurm/ --use-singularity --singularity-args "--bind /scratch/james94,/scratch2/james94 --contain --workdir /scratch/james94/tmp"
+snakemake --profile SUBMIT_CONFIG/slurm/ --use-singularity --singularity-args "--bind /scratch/james94,/scratch2/james94 --workdir /scratch/james94/tmp --contain"
 ```
 
 ### Run in background
-- 
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