diff --git a/configuration/config.yaml b/configuration/config.yaml index bc5bf016e1a7cae7c3a99c580080b599c225b737..16c2b391f627ad0da42d89e1d15bc051af8dd654 100644 --- a/configuration/config.yaml +++ b/configuration/config.yaml @@ -1,29 +1,28 @@ +### PATH TO WHERE YOU WANT YOUR RESULTS FOR THIS RUN STORED - WILL BE AUTOMATICALLY CREATED IF IT DOESN'T EXIST ### + Results: #e.g. Results: "/srv/public/users/james94/insecta_results_05_11_2021" -samplesTSV: -# e.g. samplesTSV: "/srv/public/users/james94/GEP/configuration/buildPRI.tsv" -busco5Lineage: -# e.g. busco5Lineage: "insecta" +### FULL PATH TO YOUR SAMPLESHEET ### -resources: "configuration/define_resources.yaml" +samplesTSV: +# e.g. samplesTSV: "/srv/public/users/james94/GEP/configuration/build_hifiReads_insectDATA.tsv" +### NAME OF YOUR DESIRED BUSCO DATABASE - CAN BE FULL NAME (i.e. insecta_odb10) OR A SUBSTRING (i.e. insecta) ### + +busco5Lineage: +# e.g. busco5Lineage: "insecta" -##TO BE INCLUDED SOON: Do not un-comment -#global_kmer_size: -#global_meryldb_override: -#global_size_estimate: -# FullPipeline: False -# QC_only: False -# Merqury_kmer_only: False -# Busco_only: True +### PATH TO DEFINE RESOURCES FILE - DO NOT CHANGE UNLESS YOU WISH TO USE IN A DIFFERENT LOCATION #### + +resources: "configuration/define_resources.yaml"