Datascience-SS2023

Introduction

All results from the project "Integrative Analysis of miRNA and mRNA Expression Profiles in Squamous Cell Carcinoma" are stored in this GitLab repository
with the corresponding code snippets

Folder explanation:

We separated our folders like our workflow in 6 parts:
01_Differential_Expression_Analysis: DGE Analysis and the merging results
02_MultiMIR : miRNA to target mRNA results
03_Machine_Learning: Machine learning notebooks
04_Cytoscape : miRNA-mRNA interaction using Cytoscape
05_Data_Annotation : Functional annotation results
06_Survival_Analysis: survival analysis scripts