folders

SUBMIT_CONFIG/local/config.yaml

scripts/assembly_stats/stats.py

scripts/compare_results/colouredHeatmap_legend.tsv

scripts/compare_results/fullTable_heatmap_external.R

...ts/compare_results/fullTable_heatmap_internalComparison.R

scripts/compare_results/internalComparison_legend.tsv

scripts/process_HiC/filter_five_end.pl

scripts/process_HiC/two_read_bam_combiner.pl

scripts/report/addFullTableForReport.py

scripts/report/makePDF_indivMD.py

scripts/report/pretextMapsToMarkdown.py

scripts/report/reportLandingPage.md

scripts/report/tableOnSamePage.css

scripts/standIN_files/ALT_missing.fasta