Skip to content
Snippets Groups Projects
Commit fde3dcff authored by ddepanis's avatar ddepanis
Browse files

Guille's fix

parent fbbceeac
No related branches found
No related tags found
No related merge requests found
......@@ -208,8 +208,7 @@ If you are a little uncertain about which short-read libraries you should use, s
<div id="hifi-sample"></div>
#### PacBio HiFi Sample Sheet `.tsv` - for **Build** mode
(see example [GEP/configuration/exampleSampleSheets/build_hifi_example.tsv](configuration/exampleSampleSheets/runEval_example.tsv))
(see example [GEP/configuration/exampleSampleSheets/build_hifi_example.tsv](configuration/exampleSampleSheets/build_hifi_example.tsv)
|sample|hifi_reads|meryl_kmer_size| trimSMRTbell| fastQC|
|:----|:---|:---|:----|:---|
|Your preferred identifier (Results will include this sample name in output files) <br /><br />**`string`** | **Full path** to PacBio HiFi library **in `fastq` format. Can be `.gz`ipped** | Your choice of k-mer size used to count k-mers in the reads. <br /><br /> **Recommended for PacBio Hifi is `31`**| Check for and remove any SMRT-bell adapter sequences. <br /><br /> **Possible options are `True` or `False`** | Run FastQC on the library provided in `hifi_reads` column. <br /><br /> **Possible options are `True` or `False`** |
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Please register or to comment