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bioroboticslab
robofish
model_server
Commits
6097a111
Commit
6097a111
authored
3 years ago
by
Andi Gerken
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automation/_create_dset.ipynb
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2d53557c
{
"cells": [
{
"cell_type": "code",
"execution_count": 1,
"source": [
"%reload_ext autoreload\n",
"%autoreload 2\n",
"\n",
"import fish_models\n",
"import numpy as np\n",
"import copy\n",
"from pathlib import Path\n",
"import json\n",
"\n",
"requested_dset = \"lfftr_aav_4_2piw_10_2pif_rd2_mf10_oris\"\n",
"\n",
"dataset_json = json.load(open(\"../buffer/datasets.json\", \"r\"))\n",
"meta_config = dataset_json[requested_dset]\n",
"\n",
"config = meta_config[\"dataset_config\"]"
],
"outputs": [],
"metadata": {}
},
{
"cell_type": "code",
"execution_count": 3,
"source": [
"modified_config = copy.deepcopy(config)\n",
"\n",
"if config[\"data_path\"] == \"live_female_female/train\":\n",
" modified_config[\"data_path\"] = fish_models.live_female_female_data() / \"train\"\n",
"else:\n",
" raise Exception(\"Not supported data\")\n",
"\n",
"translate = {\n",
" \"pi\":np.pi,\n",
" \"2pi\":2 * np.pi\n",
"}\n",
"for k, v in modified_config[\"raycast\"].items():\n",
" if type(v) is not list and v in translate:\n",
" modified_config[\"raycast\"][k] = translate[v]\n",
"\n",
"if \"speed_bins\" in modified_config:\n",
" sb = modified_config[\"speed_bins\"]\n",
" modified_config[\"speed_bin_borders\"] = np.linspace(sb[0], sb[1], sb[2])\n",
" modified_config.pop(\"speed_bins\")\n",
"if \"turn_bins\" in modified_config:\n",
" sb = modified_config[\"turn_bins\"]\n",
" modified_config[\"turn_bin_borders\"] = np.linspace(sb[0], sb[1], sb[2])\n",
" modified_config.pop(\"turn_bins\")\n",
"\n",
"raycast = fish_models.gym_interface.Raycast(world_bounds=([-50, -50], [50, 50]),**modified_config[\"raycast\"])\n",
"\n",
"modified_config[\"raycast\"] = raycast\n",
"dset = fish_models.datasets.io_dataset.IoDataset(**modified_config)\n",
"\n",
"storage_path = Path(\"../buffer\") / meta_config[\"path\"]\n",
"if storage_path.exists():\n",
" raise Exception(f\"File exists and will be overwritten.\")\n",
"dset.store(storage_path)"
],
"outputs": [
{
"output_type": "stream",
"name": "stdout",
"text": [
"Loading data from 20 files.\n"
]
},
{
"output_type": "stream",
"name": "stderr",
"text": [
"100%|██████████| 20/20 [00:23<00:00, 1.17s/it]\n"
]
},
{
"output_type": "stream",
"name": "stdout",
"text": [
"Calculating views from 20 files.\n"
]
},
{
"output_type": "stream",
"name": "stderr",
"text": [
" 20%|██ | 4/20 [00:11<00:48, 3.01s/it]"
]
}
],
"metadata": {}
},
{
"cell_type": "code",
"execution_count": null,
"source": [],
"outputs": [],
"metadata": {}
}
],
"metadata": {
"orig_nbformat": 4,
"language_info": {
"name": "python",
"version": "3.8.10",
"mimetype": "text/x-python",
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"pygments_lexer": "ipython3",
"nbconvert_exporter": "python",
"file_extension": ".py"
},
"kernelspec": {
"name": "python3",
"display_name": "Python 3.8.10 64-bit"
},
"interpreter": {
"hash": "e7370f93d1d0cde622a1f8e1c04877d8463912d04d973331ad4851f04de6915a"
}
},
"nbformat": 4,
"nbformat_minor": 2
}
\ No newline at end of file
%% Cell type:code id: tags:
```
%reload_ext autoreload
%autoreload 2
import fish_models
import numpy as np
import copy
from pathlib import Path
import json
requested_dset = "lfftr_aav_4_2piw_10_2pif_rd2_mf10_oris"
dataset_json = json.load(open("../buffer/datasets.json", "r"))
meta_config = dataset_json[requested_dset]
config = meta_config["dataset_config"]
```
%% Cell type:code id: tags:
```
modified_config = copy.deepcopy(config)
if config["data_path"] == "live_female_female/train":
modified_config["data_path"] = fish_models.live_female_female_data() / "train"
else:
raise Exception("Not supported data")
translate = {
"pi":np.pi,
"2pi":2 * np.pi
}
for k, v in modified_config["raycast"].items():
if type(v) is not list and v in translate:
modified_config["raycast"][k] = translate[v]
if "speed_bins" in modified_config:
sb = modified_config["speed_bins"]
modified_config["speed_bin_borders"] = np.linspace(sb[0], sb[1], sb[2])
modified_config.pop("speed_bins")
if "turn_bins" in modified_config:
sb = modified_config["turn_bins"]
modified_config["turn_bin_borders"] = np.linspace(sb[0], sb[1], sb[2])
modified_config.pop("turn_bins")
raycast = fish_models.gym_interface.Raycast(world_bounds=([-50, -50], [50, 50]),**modified_config["raycast"])
modified_config["raycast"] = raycast
dset = fish_models.datasets.io_dataset.IoDataset(**modified_config)
storage_path = Path("../buffer") / meta_config["path"]
if storage_path.exists():
raise Exception(f"File exists and will be overwritten.")
dset.store(storage_path)
```
%% Output
Loading data from 20 files.
100%|██████████| 20/20 [00:23<00:00, 1.17s/it]
Calculating views from 20 files.
20%|██ | 4/20 [00:11<00:48, 3.01s/it]
%% Cell type:code id: tags:
```
```
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