Skip to content
Snippets Groups Projects
Commit 8e75ceb6 authored by james94's avatar james94
Browse files

Update README.md

parent 79a40726
Branches
No related tags found
No related merge requests found
......@@ -22,12 +22,19 @@
1. [**Build** meryl k-mer databases](#build-meryl-k-mer-databases)
<br>
![](https://i.imgur.com/HK4ZMi2.png)
<br>
- Requires: WGS sequencing libraries (Pacbio HiFi or Illumina PE short-insert `.fastq`'s)
- Output: (`.meryl`) k-mer database
<br>
<br>
2. [Assembly **Evaluation**](#assembly-evaluation)
<br>
![](https://i.imgur.com/8eLKPtK.png)
<br>
- Requires: (`.meryl`) k-mer databases and corresponding genome assemblies (`.fasta`'s) you wish to evaluate. As well as HiC Libraries as optional input.
- Output:
- Assembly Stats (L#, N#, Scaffold, contig, etc.)
......@@ -37,6 +44,7 @@
- genomescope profile
- Pretext Map (optional)
- **PDF Report aggregating all of the above**
<br>
![](https://i.imgur.com/hWMo4PF.png)
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Please register or to comment