comments

configuration/config.yaml

 
+### PATH TO WHERE YOU WANT YOUR RESULTS FOR THIS RUN STORED - WILL BE AUTOMATICALLY CREATED IF IT DOESN'T EXIST  ###
+
 Results:
 #e.g. Results: "/srv/public/users/james94/insecta_results_05_11_2021"
 
-samplesTSV:
-# e.g. samplesTSV: "/srv/public/users/james94/GEP/configuration/buildPRI.tsv"
 
-busco5Lineage:
-# e.g. busco5Lineage: "insecta"
 
 
+### FULL PATH TO YOUR SAMPLESHEET    ###
 
-resources:             "configuration/define_resources.yaml"
+samplesTSV:
+# e.g. samplesTSV: "/srv/public/users/james94/GEP/configuration/build_hifiReads_insectDATA.tsv"
 
 
 
 
+###     NAME OF YOUR DESIRED BUSCO DATABASE -  CAN BE FULL NAME (i.e. insecta_odb10) OR A SUBSTRING (i.e. insecta)   ###
+
+busco5Lineage:
+# e.g. busco5Lineage: "insecta"
 
 
 
 
-##TO BE INCLUDED SOON: Do not un-comment
-#global_kmer_size:
-#global_meryldb_override:
-#global_size_estimate:
-# FullPipeline: False
-# QC_only: False
-# Merqury_kmer_only: False
-# Busco_only:  True
+### PATH TO DEFINE RESOURCES FILE - DO NOT CHANGE UNLESS YOU WISH TO USE IN A DIFFERENT LOCATION  ####
+
+resources:             "configuration/define_resources.yaml"