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Commit d57f9d47 authored by james94's avatar james94
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### PATH TO WHERE YOU WANT YOUR RESULTS FOR THIS RUN STORED - WILL BE AUTOMATICALLY CREATED IF IT DOESN'T EXIST ###
Results: Results:
#e.g. Results: "/srv/public/users/james94/insecta_results_05_11_2021" #e.g. Results: "/srv/public/users/james94/insecta_results_05_11_2021"
samplesTSV:
# e.g. samplesTSV: "/srv/public/users/james94/GEP/configuration/buildPRI.tsv"
busco5Lineage:
# e.g. busco5Lineage: "insecta"
### FULL PATH TO YOUR SAMPLESHEET ###
resources: "configuration/define_resources.yaml" samplesTSV:
# e.g. samplesTSV: "/srv/public/users/james94/GEP/configuration/build_hifiReads_insectDATA.tsv"
### NAME OF YOUR DESIRED BUSCO DATABASE - CAN BE FULL NAME (i.e. insecta_odb10) OR A SUBSTRING (i.e. insecta) ###
busco5Lineage:
# e.g. busco5Lineage: "insecta"
##TO BE INCLUDED SOON: Do not un-comment ### PATH TO DEFINE RESOURCES FILE - DO NOT CHANGE UNLESS YOU WISH TO USE IN A DIFFERENT LOCATION ####
#global_kmer_size:
#global_meryldb_override: resources: "configuration/define_resources.yaml"
#global_size_estimate:
# FullPipeline: False
# QC_only: False
# Merqury_kmer_only: False
# Busco_only: True
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