report, update general README, minor changes

tasks/src/direct_simulation.py

@@ -11,7 +11,7 @@ from jobs.src.system import GravitationalSystem
 from jobs.src.integrator import verlet
 from tasks.src.utils import plot_orbits
 
-INPUT_PATH = "tasks/inputs"
+INPUT_PATH = "tasks/inputs/"
 input_file = csv.DictReader(open(INPUT_PATH + "initial.csv", encoding="utf8"))
 
 r0 = []

tasks/src/ff_simulation_3D.py

 """
-This code contains a class to simulate the collision of a Galaoxy with a given
+This code contains a class to simulate the collision of a Galaxy with a given
 number of particles/planets. To choose the initial conditions regadring initial
 positions, velocities and sometimes the number of particles, please check the
 function "initialize_particles". To choose initial state of the system, 

tasks/tests/test_direct_simulation.py

@@ -163,10 +163,10 @@ class IntegratorJPLTest(unittest.TestCase):
         plot_orbits(q, body_names)
         q_comp = q.reshape(len(t), 11, 3)
 
-        ## checking overlap of orbits
+        logger.info("Checking overlap of orbits... ")
         self.assertTrue(np.max(np.linalg.norm(q_comp, axis=2) - np.linalg.norm(trajs, axis=2)) < 35)
 
-        ## checking total energy conservation
+        logger.info("Checking total energy conservation... ")
         E_tot_sys = E_tot(p, q, body_GMs)
         self.assertTrue(np.greater(1e-8 + np.zeros(E_tot_sys.shape[0]), E_tot_sys - E_tot_sys[0]).all())
         plt.figure()
@@ -177,7 +177,7 @@ class IntegratorJPLTest(unittest.TestCase):
         plt.tight_layout()
         plt.show()
 
-        ## checking total linear momentum conservation
+        logger.info("Checking total linear momentum conservation... ")
         lin_mom_sys = lin_mom_tot(p, body_GMs)
         self.assertTrue(np.greater(1e-8 + np.zeros(lin_mom_sys.shape[0]), lin_mom_sys - lin_mom_sys[0]).all())
         plt.figure()
@@ -188,7 +188,7 @@ class IntegratorJPLTest(unittest.TestCase):
         plt.tight_layout()
         plt.show()
 
-        ## checking total angular momentum conservation
+        logger.info("Checking total angular momentum conservation... ")
         am_mom_sys = am_tot(p, q, body_GMs)
         self.assertTrue(np.greater(1e-20 + np.zeros(am_mom_sys.shape[0]), am_mom_sys - am_mom_sys[0]).all())
         plt.figure()