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Commit a16d8864 authored by james94's avatar james94
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dictionary misnamed

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...@@ -236,7 +236,7 @@ elif set(['ID', 'PRI_asm', 'ALT_asm', 'merylDB', 'merylDB_kmer', 'genomeSize', ' ...@@ -236,7 +236,7 @@ elif set(['ID', 'PRI_asm', 'ALT_asm', 'merylDB', 'merylDB_kmer', 'genomeSize', '
samples=samples.set_index(['ID']) samples=samples.set_index(['ID'])
testDict=samples.T.to_dict('list') dictSamples=samples.T.to_dict('list')
ruleAllQCFiles=[] ruleAllQCFiles=[]
ruleAll=expand(os.path.join(config['Results'],"1_evaluation/{asmID}/06_keyResults/{asmID}_aggregatedResults.tsv"), asmID=list(dictSamples.keys())), os.path.join(config['Results'],"1_evaluation/finalResults/Combined_Results_FULLTABLE.tsv"), os.path.join(config['Results'],"1_evaluation/finalResults/FULL_Report_PDF.pdf"),os.path.join(config['Results'],"1_evaluation/finalResults/FULL_TABLE_PDF.pdf") ruleAll=expand(os.path.join(config['Results'],"1_evaluation/{asmID}/06_keyResults/{asmID}_aggregatedResults.tsv"), asmID=list(dictSamples.keys())), os.path.join(config['Results'],"1_evaluation/finalResults/Combined_Results_FULLTABLE.tsv"), os.path.join(config['Results'],"1_evaluation/finalResults/FULL_Report_PDF.pdf"),os.path.join(config['Results'],"1_evaluation/finalResults/FULL_TABLE_PDF.pdf")
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