add general workflow image to READme

README.md

@@ -16,9 +16,13 @@
 
 ---
 
+## General Workflow of Genome evaluation
 
+![](https://i.imgur.com/tJ01F00.png)
 
-## The Workflow - Two *Modes*
+
+
+## The GEP Workflow - Two *Modes*
 
 
 1. [**Build** meryl k-mer databases](#build-meryl-k-mer-databases)
@@ -347,7 +351,7 @@ The `--contain` flag ensures that the container is completely kept separate from
 #### EXAMPLE SINGULARITY EXECUTION
 
 ```
-snakemake --profile SUBMIT_CONFIG/slurm/ --use-singularity --singularity-args "--bind /scratch/james94,/scratch2/james94 --contain --workdir /scratch/james94/tmp"
+snakemake --profile SUBMIT_CONFIG/slurm/ --use-singularity --singularity-args "--bind /scratch/james94,/scratch2/james94 --workdir /scratch/james94/tmp --contain"
 ```
 
 ### Run in background